Struct vcf_rider::fasta::Fasta

pub struct Fasta {
    pub id: String,
    pub sequence: Vec<u8>,
    pub background: Vec<f64>,
}

Struct representing a fasta: its id, then the sequence (encoded by a vector of u8, with ACGTN -> 01234) and the background frequencies of nucleotides (needed to compute TBA values)

Fields

id: String

The id of this fasta

sequence: Vec<u8>

The u8 encoded sequence

background: Vec<f64>

Background frequencies of ACGT in this fasta

Trait Implementations

impl Debug for Fasta

fn fmt(&self, __arg_0: &mut Formatter) -> Result

Formats the value using the given formatter.